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Immunochip analysis identifies association of the RAD50/IL13 region with human longevity

机译:免疫芯片分析可确定RAD50 / IL13区域与人类寿命的相关性

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摘要

Human longevity is characterized by a remarkable lack of confirmed genetic associations. Here, we report on the identification of a novel locus for longevity in the RAD50/IL13 region on chromosome 5q31.1 using a combined European sample of 3208 long-lived individuals (LLI) and 8919 younger controls. First, we performed a large-scale association study on 1458 German LLI (mean age 99.0 years) and 6368 controls (mean age 57.2 years) by targeting known immune-associated loci covered by the Immunochip. The analysis of 142 136 autosomal single nucleotide polymorphisms (SNPs) revealed an Immunochip-wide significant signal (PI mmunochip = 7.01 × 10-9 ) for the SNP rs2075650 in the TOMM40/APOE region, which has been previously described in the context of human longevity. To identify novel susceptibility loci, we selected 15 markers with PI mmunochip < 5 × 10-4 for replication in two samples from France (1257 LLI, mean age 102.4 years; 1811 controls, mean age 49.1 years) and Denmark (493 LLI, mean age 96.2 years; 740 controls, mean age 63.1 years). The association at SNP rs2706372 replicated in the French study collection and showed a similar trend in the Danish participants and was also significant in a meta-analysis of the combined French and Danish data after adjusting for multiple testing. In a meta-analysis of all three samples, rs2706372 reached a P-value of PI mmunochip+Repl = 5.42 × 10-7 (OR = 1.20; 95% CI = 1.12-1.28). SNP rs2706372 is located in the extended RAD50/IL13 region. RAD50 seems a plausible longevity candidate due to its involvement in DNA repair and inflammation. Further studies are needed to identify the functional variant(s) that predispose(s) to a long and healthy life.
机译:人类寿命的特征是明显缺乏已证实的遗传关联。在这里,我们报告使用3208个长寿个体(LLI)和8919个年轻对照的欧洲组合样本,鉴定了5q31.1号染色体上RAD50 / IL13区域中长寿的新基因座。首先,我们针对了1458个德国LLI(平均年龄99.0岁)和6368个对照(平均年龄57.2岁)进行了大规模的关联研究,以免疫芯片覆盖的已知免疫相关基因座为目标。对142136个常染色体单核苷酸多态性(SNP)的分析揭示了TOMM40 / APOE区中SNP rs2075650的全免疫芯片显着信号(PI mmunochip = 7.01×10-9),先前已在人类的背景下进行过描述长寿。为了鉴定新的易感基因座,我们从法国(1257 LLI,平均年龄102.4岁; 1811对照,平均年龄49.1岁)和丹麦(493 LLI,平均年龄)的两个样本中选择了15个PI mmunochip <5×10-4的标记进行复制年龄96.2岁; 740名对照者,平均年龄63.1岁。 SNP rs2706372处的关联在法国研究样本中重复存在,并且在丹麦参与者中显示出相似的趋势,并且在对多项测试进行调整后,对法国和丹麦组合数据的荟萃分析也具有重要意义。在所有三个样本的荟萃分析中,rs2706372的P值达到PI mmunochip + Repl = 5.42×10-7(OR = 1.20; 95%CI = 1.12-1.28)。 SNP rs2706372位于扩展的RAD50 / IL13区域。由于RAD50参与DNA修复和炎症反应,因此它似乎是长寿的候选药物。需要进一步的研究来鉴定导致长期健康生活的功能变异。

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